学会発表・論文掲載
Satoshi Takahashi, Masamichi Takahashi, Manabu Kinoshita, Mototaka Miyake, Risa Kawaguchi, Naoki Shinojima, Akitake Mukasa, Kuniaki Saito, Motoo Nagane, Ryohei Otani, Fumi Higuchi, Shota Tanaka, Nobuhiro Hata, Kaoru Tamura, Kensuke Tateishi, Ryo Nishikawa, Hideyuki Arita, Masahiro Nonaka, Takehiro Uda, Junya Fukai, Yoshiko Okita, Naohiro Tsuyuguchi, Yonehiro Kanemura, Kazuma Kobayashi, Jun Sese, Koichi Ichimura, Yoshitaka Narita, Ryuji Hamamoto
Fine-Tuning Approach for Segmentation of Gliomas in Brain Magnetic Resonance Images with a Machine Learning Method to Normalize Image Differences among Facilities
Cancers 2021, 13(6), 1415, DOI:10.3390/cancers13061415
Rio Ikuta, Kanae Myoenzono, Jun Wasano, Kayoko Hamaguchi-Hamada, Shun Hamada, Mami Kurumata-Shigeto
N-cadherin localization in taste buds of mouse circumvallate papillae
J Comp Neurol, 2020 Dec 14, DOI:10.1002/cne.25090
Ryuji Hamamoto, Kruthi Suvarna, Masayoshi Yamada, Kazuma Kobayashi, Norio Shinkai, Mototaka Miyake, Masamichi Takahashi, Shunichi Jinnai, Ryo Shimoyama, Akira Sakai, Ken Takasawa, Amina Bolatkan, Kanto Shozu, Ai Dozen, Hidenori Machino, Satoshi Takahashi, Ken Asada, Masaaki Komatsu, Jun Sese, Syuzo Kaneko
Application of Artificial Intelligence Technology in Oncology: Towards the Establishment of Precision Medicine
Cancers 2020, 12(12), 3532; DOI:10.3390/cancers12123532
Reiko Akiyama, Jianqiang Sun, Masaomi Hatakeyama, Heidi E.L. Lischer, Roman V. Briskine, Angela Hay, Xiangchao Gan, Miltos Tsiantis, Hiroshi Kudoh, Masahiro M. Kanaoka, Jun Sese, Kentaro K. Shimizu, Rie Shimizu-Inatsugi
Fine-scale empirical data on niche divergence and homeolog expression patterns in an allopolyploid and its diploid progenitor species
New Phytologist, 22 November 2020, NPH17101, DOI:10.1111/nph.17101
Kentaro K. Shimizu, Dario Copetti, Moeko Okada, Thomas Wicker, Toshiaki Tameshige, Masaomi Hatakeyama, Rie Shimizu-Inatsugi, Catharine Aquino, Kazusa Nishimura, Fuminori Kobayashi, Kazuki Murata, Tony Kuo, Emily Delorean, Jesse Poland, Georg Haberer, Manuel Spannagl, Klaus F. X. Mayer, Juan Gutierrez-Gonzalez, Gary J. Muehlbauer, Cecile Monat, Axel Himmelbach, Sudharsan Padmarasu, Martin Mascher, Sean Walkowiak, Tetsuya Nakazaki, Tomohiro Ban, Kanako Kawaura1 Hiroyuki Tsuji, Curtis Pozniak, Nils Stein, Jun Sese, Shuhei Nasuda, Hirokazu Handa
De Novo Genome Assembly of the Japanese Wheat Cultivar Norin 61 Highlights Functional Variation in Flowering Time and Fusarium Resistance Genes in East Asian Genotypes
Plant and Cell Physiology (2020), DOI:10.1093/pcp/pcaa152
Sean Walkowiak, Liangliang Gao, Cecile Monat, Georg Haberer, Mulualem T. Kassa, Jemima Brinton, Ricardo H. Ramirez-Gonzalez, Markus C. Kolodziej, Emily Delorean, Dinushika Thambugala, Valentyna Klymiuk, Brook Byrns, Heidrun Gundlach, Venkat Bandi, Jorge Nunez Siri, Kirby Nilsen, Catharine Aquino, Axel Himmelbach, Dario Copetti, Tomohiro Ban, Luca Venturini, Michael Bevan, Bernardo Clavijo, Dal-Hoe Koo, Jennifer Ens, Krystalee Wiebe, Amidou N’Daiye, Allen K. Fritz, Carl Gutwin, Anne Fiebig, Christine Fosker, Bin Xiao Fu, Gonzalo Garcia Accinelli, Keith A Gardner, Nick Fradgley, Juan Gutierrez-Gonzalez, Gwyneth Halstead-Nussloch, Masaomi Hatakeyama, Chu Shin Koh, Jasline Deek, Alejandro C. Costamagna, Pierre Fobert, Darren Heavens, Hiroyuki Kanamori, Kanako Kawaura, Fuminori Kobayashi, Ksenia Krasileva, Tony Kuo, Neil McKenzie, Kazuki Murata, Yusuke Nabeka, Timothy Paape, Sudharsan Padmarasu, Lawrence Percival-Alwyn, Sateesh Kagale, Uwe Scholz, Jun Sese, Philomin Juliana, Ravi Singh, Rie Shimizu-Inatsugi, David Swarbreck, James Cockram, Hikmet Budak, Toshiaki Tameshige, Tsuyoshi Tanaka, Hiroyuki Tsuji, Jonathan Wright, Jianzhong Wu, Burkhard Steuernagel, Ian Small, Sylvie Cloutier, Gabriel Keeble-Gagnere, Gary Muehlbauer, Josquin Tibbets, Shuhei Nasuda, Joanna Melonek, Pierre J. Hucl, Andrew Sharpe, Matthew Clark, Erik Legg, Arvind Bharti, Peter Langridge, Anthony Hall, Cristobal Uauy, Martin Mascher, Simon G. Krattinger, Hirokazu Handa, Kentaro K. Shimizu, Assaf Distelfeld, Ken Chalmers, Beat Keller, Klaus F. X. Mayer, Jesse Poland, Nils Stein, Curt A. McCartney, Manuel Spannagl, Thomas Wicker, and Curtis J. Pozniak
Multiple wheat genomes reveal global variation in modern breeding
Nature (2020), DOI:10.1038/s41586-020-2961-x
Satoshi Takahashi, Ken Asada, Ken Takasawa, Ryo Shimoyama, Akira Sakai, Amina Bolatkan, Norio Shinkai, Kazuma Kobayashi, Masaaki Komatsu, Syuzo Kaneko, Jun Sese, Ryuji Hamamoto
Predicting Deep Learning Based Multi-Omics Parallel Integration Survival Subtypes in Lung Cancer Using Reverse Phase Protein Array Data
Biomolecules 2020, 10(10), 1460, DOI:10.3390/biom10101460
Tomoko Ishikawa-Fujiwara, Yoshihiro Fujikawa, Andres Canela, Tatsuma Shoji, Fei Sun, Jun Sese, Takeshi Todo
Genome analysis of rev3l deficient medaka mutant
2020年10月15〜16日, 日本放射線影響学会第63回大会, オンライン開催
Jianqiang Sun, Rie Shimizu-Inatsugi, Hugo Hofhuis, Kentaro Shimizu, Angela Hay, Kentaro K. Shimizu and Jun Sese
A recently formed triploid Cardamine insueta inherits leaf vivipary and submergence tolerance traits of parents
Frontiers in Genetics, October 2020, Volume11, 567262, DOI:10.3389/fgene.2020.567262
孫 建強， 爲重 才覚， 秋山 玲子， 杉阪 次郎， 庄司 竜麻， 岡田 萌子， 清水（稲継） 理恵， 清水 健太郎， 瀬々 潤
気象データと遺伝子発現量データを使用した形質予測モデル
2020年5月24日, 農業情報学会 2020年度年次大会, オンライン開催
Yoshihiro Fujikawa, Tomoko Ishikawa‐Fujiwara, Tony Kuo, Norio Shinkai, Tatsuma Shoji, Takashi Kawasaki, Yasuhiro Kamei, Yoshiyuki Sakuraba, Ayuko Sato, Masato Kinoshita, Yoichi Gondo, Shunsuke Yuba, Tohru Tsujimura, Jun Sese, Takeshi Todo
Involvement of Rev1 in alkylating agent‐induced loss of heterozygosity in Oryzias latipes
Genes to Cell, 2020, Volume25, Issue2, February 2020, 124-138, DOI:10.1111/gtc.12746
Ken Asada, Kazuma Kobayashi, Samuel Joutard, Masashi Tubaki, Satoshi Takahashi, Ken Takasawa, Masaaki Komatsu, Syuzo Kaneko, Jun Sese, Ryuji Hamamoto
Uncovering Prognosis-Related Genes and Pathways by Multi-Omics Analysis in Lung Cancer
Biomolecules 2020, 10(4), 524, DOI:10.3390/biom10040524
Yasunari Satoh, Jun-ichi Asakawa, Mayumi Nishimura, Tony Kuo, Norio Shinkai, Harry M. Cullings, Yohei Minakuchi, Jun Sese, Atsushi Toyoda, Yoshiya Shimada, Nori Nakamura, Arikuni Uchimura
Characteristics of induced mutations in offspring derived from irradiated mouse spermatogonia and mature oocytes
Scientific Reports 10, 37 (2020), DOI:10.1038/s41598-019-56881-2
Aika Terada
Interpretable prediction of cancer types with LAMP and two-phase method
2019年12月25-26日, 情報系 WINTER FESTA Episode 5, 一橋講堂＠東京都
Hongdi Wang, Azusa Sawai, Noriyuki Toji, Rintaro Sugioka, Yukino Shibata, Yuika Suzuki, Yu Ji, Shin Hayase, Satoru Akama, Jun Sese, Kazuhiro Wada
Transcriptional regulatory divergence underpinning species-specific learned vocalization in songbirds
PLoS Biology, 2019 Nov 13;17(11):e3000476, DOI: 10.1371/journal.pbio.3000476
Ayami Matsushima, Jun Sese, Kanako O. Koyanagi
Biosynthetic Short Neuropeptides: A Rational Theory Based on Experimental Results for the Missing Pain‐Relief Opioid Endomorphin Precursor Gene
ChemBioChem, Volume20, Issue16 Special Issue:10th IPS, 2019, 2054-2058, https://doi.org/10.1002/cbic.201900317
Risa Kawaguchi, Hisanori Kiryu, Junichi Iwakiri, Jun Sese
reactIDR: evaluation of the statistical reproducibility of high-throughput structural analyses towards a robust RNA structure prediction
BMC Bioinformatics 2019, 20(Suppl 3):130 https://doi.org/10.1186/s12859-019-2645-4
Tony C Y Kuo, Masaomi Hatakeyama, Toshiaki Tameshige, Kentaro K Shimizu, Jun Sese
Homeolog expression quantification methods for allopolyploids
Briefings in Bioinformatics, bby121, https://doi.org/10.1093/bib/bby121
Shinya Oki, Tazro Ohta, Go Shioi, Hideki Hatanaka, Osamu Ogasawara, Yoshihiro Okuda,Hideya Kawaji, Ryo Nakaki, Jun Sese, and Chikara Meno
ChIP-Atlas: a data-mining suite powered by full integration of public ChIP-seq data.
EMBO Reports, 2018, e46255.（doi: 10.15252/embr.201846255）
メディア掲載
瀬々 潤
コムギのゲノム国際チーム解読
日本経済新聞朝刊 26面（2020年12月6日発売）
瀬々 潤
世界のパンコムギ15品種 高精度ゲノム解読
週刊 科学新聞 第3804号4面（2020年12月4日発売）
瀬々 潤
コムギ15種ゲノム解読 横浜市大など参加 10カ国共同研究
日刊工業新聞 24面（2020年11月26日発売）
小貫 真希、瀬々 潤
ディープラーニングの基礎知識─押さえておくべき用語と手法
インナービジョン社 「iv-MOOK vol.1 学ぶ！ 究める！ 医療AI ディープラーニングの基礎から研究最前線まで」 （2020年4月21日発売）
瀬々 潤
第2回日本メディカルAI学会学術集会が開催 – メディカルAIの社会実装に向けた議論が進む
インナービジョン社 「月刊インナービジョン」 2020年3月号 Vol.35 No.3（2020年2月25日発売） および innavi net（2020年2月12日付）
瀬々 潤、井上 浄
“個体”のデータを徹底追求しよう！そこから未来が見えてくる――「人」の解明目指すヒューマノーム研究所（前編）
民間の研究所の力で、日本を再び科学技術立国に――ヒューマノーム研究所が抱く野望（後編）
日経DIGITALIST / Innovators（2019年3月26日〜3月27日付）
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